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FedPyDESeq2
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owkin/fedpydeseq2
FedPyDESeq2
owkin/fedpydeseq2
General
General
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Installation
Contributing
References
API
API
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Running an experiment
Core
Core
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Build design matrix
Compute size factors
Estimating LFCs and dispersions
Computing the Cooks distance
Replacing outliers
Replace refitted values
Computing statistics and p-values
Saving results
Strategy
Utils
Utils
Core
Substra
Federated algorithms
Federated algorithms
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Compute trimmed mean
Compute dispersions with grid search
Federated IRLS
Federated ProxQuasiNewton
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fedpydeseq2
main module