plismbench.models.genbio_ai module#

Models from GenBio AI company.

class plismbench.models.genbio_ai.GenBioPathFM(device: int | list[int] | None = -1, mixed_precision: bool = False)[source]#

Bases: Extractor

GenBio_pathlib.PathFM model developped by GenBio AI available on Hugging-Face (1).

Note

  1. https://huggingface.co/genbio-ai/genbio-pathfm

Parameters:

  • device (int | list[int] | None = DEFAULT_DEVICE,) – Compute resources to use. If None, will use all available GPUs. If -1, extraction will run on CPU.

  • mixed_precision (bool = True) – Whether to use mixed_precision.

property transform: Compose#

Transform method to apply element wise.